Welcome to Live Web-servers

We have also provided live web-server facility in OSDDlinux. Following are the currently available live web-servers in the OSDDlinux:

Protein Structure Prediction
APSSP2Advanced Protein Secondary Structure Prediction Server
PSAAnalysis of Protein Sequence and Multiple Alignment
BetatPred2Prediction of betaturns in proteins
CHpredictPrediction of CH..O and CH..Pi interactions
AR_NHPredPrediction of aromatic backbone NH interaction in proteins
TBBPredPrediction of Transmembrane Beta Barrel in Proteins
BetaTurnsPrediction of betaturn types in protein
BhairPredPrediction of Beta Hairpins
GammaPredPrediction of Gamma turns in protein
AlphaPredPrediction of Alpha turns in protein
PepStr3D structure prediction of bioactive peptides
SarPredA neural network based method predicts the real value of surface acessibility (SA) by using multiple sequence alignment

Epitope based Vaccines
PROPRED1prediction of promiscuous MHC Class-I binding sites
nHLApredA neural network based MHC Class-I Binding Peptide Prediction Server
MMBpredPrediction of mutated high affinity and promiscuous MHC class-I binding peptides from protein sequence
PcleavageAn SVM based method for proteosome cleavage prediction
TAPpredTAPPred is a tool for predicting binding affinity of peptides toward the TAP transporter
CTLpred CTLpred: Prediction of cytotoxic T cell epitopes
PROPREDPrediction of HLA-DR binding sites
HLADR4predSVM based method for predicting HLA-DRB1 binding peptides in an antigen sequence
CBtopeConformational B-cell epitope prediction
LBtopePrediction of linear B-cell epitopes
BCEpredBcepred: Prediction of linear B-cell epitopes, using physico-chemical properties
ABCpredPrediction of B-cell epitopes in antigen sequence
TmhcpredPrediction of MHC Class I and II binding peptides
IFNepitopeA server for predicting and designing interferon-gamma inducing epitopes
IL4predA tool to predict interleukin-4 inducing epitopes

Functional annotation of proteins
NRpredA server for classification of nuclear receptors
GPCRpredPrediction of families and subfamilies of G-protein coupled receptors
GPCRsclassClassification of amine type of G-protein-coupled receptors
ESLpredESLpred: SVM Based Method for Subcellular Localization of Eukaryotic Proteins
PSLpredPrediction of subcellular localization of bacterial proteins
BTXpredPrediction of Bacterial Toxins
MitpredPrediction of mitochondrial proteins using support vector machine and hidden Markov model
SRTpredSVM-based method for the classification of protein sequence as secretory or non-secretory protein
OxypredPrediction of the oxygen-binding proteins
VGIchanVoltage gated ion channel prediction server
HSLpredHSLpred: A server for the prediction of the subcellular localization of human protein
GSTpredPrediciton of Glutathione S-transferase protein
NTXpredPrediction of Neurotoxins and its source and probable function from primary amino acid sequence
VICMpredPrediction of Virulence factors, Information molecule, Cellular process and Metabolism molecule in the Bacterial proteins
ALGpredPrediction of allergenic proteins and mapping of IgE epitopes
PseaPredPrediction of proteins secreted by malarial parasite P.falciparum into infected-erythrocyte
RSLPredA SVM based method for subcellular localization prediction of rice proteins
ESLPred2ESLpred2 is an improved version of ESLpred, for predicting eukaryotic sub cellular localization
ChemoPredA tool to predict chemokine and their receptor
PFMpredPredicting mitochondrial proteins of P.falciparum
TBPredSupport Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs
ProPrintPrediction of physical or functional interactions between protein molecules
ISSpredIntein Splice Site Prediction
Cancer_PredA method for the prediction of Cancer lectins

Molecular Interactions and modifications
ATPintPrediction of ATP interacting protein residues
ADPintPrediction of ADP interacting protein residues
FADpredA webserver for the prediction of FAD interacting residues
GTPbinderPrediction of GTP interacting residues, dipeptides and tripeptides in a protein from its evolutionary information
NADbinderPrediction of NAD interacting residues in proteins
PreMieRA webserver for the prediction of Mannose Interacting residue
PprintA tool for predicting RNA-binding residues of a protein
GlycoPPA webserver for predicting potential N-and O-glycosites in prokaryotic protein sequence(s)
GlycoEPIn silico platform for prediction of N-, O- and C-Glycosites in eukaryotic protein sequences
tRNAmodPrediction of transfer RNA (tRNA) modifications
VitaPredPrediction method for the vitamin-interacting residues in protein sequences
RNApinSupport Vector Machines (SVMs) based web-server for the prediction of Protein Interacting Nucleotides (PINs) in RNA sequences
RNAintA tool for the prediction of RNA interacting mono-residues (RIMRs), di-residues (RIDRs), tri-residues (RITRs), tetra-residues (RITTRs) and penta-residues (RIPRs) from protein sequences

Therapeutic Peptides
CellPPDCellPPD predicts the cell penetration efficiency of the peptides
TumorHPDTumorHPD predicts the tumor homing property of the peptides
AntiCPAntiCP predicts the anticancer activity of the peptides
ToxinpredToxinPred predicts the toxicity of the peptides
desiRmDesigning of Highly Effective Complementary and Mismatch siRNAs for Silencing a Gene
AntiBPAntiBP: A server for the prediction of the antibacterial peptides
AntiBP2AntiBP2: A server for the prediction of the antibacterial peptides

Drug Designing
DrugMintA method developed for predicting drug-likelihood of a compound
WebCDKWeb-interface for CDK libraries

Genome Annotation
icaarsIdentification & classification of aminoacyl-tRNA synthetases
MARSpredPrediction of mitochondrial aminoacyl-tRNA synthetases
RNAconPrediction & classification of non-coding RNAs (ncRNA)