Software for Biomolecules for Therapeutics
Sr. NO. | Software name | Usage |
1 | CellPPD | CellPPD is an in silico method, which is developed to predict and design efficient cell penetrating peptides (CPPs). |
2 | ToxinPred | ToxinPred is an in silico method, which is developed to predict and design toxic/non-toxic peptides. |
3 | DesiRM | Designing of complementary and mismatch siRNAs |
4 | AntiBP | Antibp server predicts the antibacterial peptides in a protein sequence. |
5 | AntiBP2 | AntiBP2 is a improved server predicts the antibacterial peptides in a protein sequence. |
Sr. NO. | Software name | Usage |
1 | CellPPD | CellPPD is an in silico method, which is developed to predict and design efficient cell penetrating peptides (CPPs). |
2 | ToxinPred | ToxinPred is an in silico method, which is developed to predict and design toxic/non-toxic peptides. |
3 | DesiRM | Designing of complementary and mismatch siRNAs |
4 | Antibp | Antibp server predicts the antibacterial peptides in a protein sequence. |
5 | Antibp2 | AntiBP2 is a improved server predicts the antibacterial peptides in a protein sequence. |
Sr. NO. | Software name | Usage |
1 | CellPPD | cellppd.pl -i input.fasta -o out -t 0.5 -m 1 -i Sequence in FASTA format -o out put file -t SVM threshold -m Method |
2 | ToxinPred | toxinpred.pl -i example.fasta -o out -t 0.5 -m 1 |
3 | DesiRM | ./desirm_sirna.pl -i input_file -t threshold_of_svm -o output_file |
4 | Antibp | antibp.pl -i input_file -o output -p path |
5 | Antibp2 | antibp2.pl -i input_file -o output -p path |
Name | Description | Usage |
CellPPD | CellPPD is an in silico method, which is developed to predict and design efficient cell penetrating peptides (CPPs). | cellppd.pl -i input.fasta -o out -t 0.5 -m 1 -i Sequence in FASTA format -o out put file -t SVM threshold -m Method |
ToxinPred | ToxinPred is an in silico method, which is developed to predict and design toxic/non-toxic peptides. | toxinpred.pl -i example.fasta -o out -t 0.5 -m 1 |
DesiRM | Designing of complementary and mismatch siRNAs | ./desirm_sirna.pl -i input_file -t threshold_of_svm -o output_file |
Antibp | Antibp server predicts the antibacterial peptides in a protein sequence. | antibp.pl -i input_file -o output -p path |
Antibp2 | AntiBP2 is a improved server predicts the antibacterial peptides in a protein sequence. | antibp2.pl -i input_file -o output -p path |
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