Welcome to Live Galaxy at OSDDlinux
Galaxy is an open, web-based platform for data intensive research. OSDDlinux is an open source operating system for drug discovery (customized linux) that integrates most of open source or freely available computational tools required for drug discovery. OSDDlinux is an in silico module of Open Source for Drug Discovery (OSDD). This is live Galaxy of OSDDlinux which integrate most of open sourece software and web services available at OSDDlinux. Overall this Galaxy at OSDDlinux will provide a open source based platform for drug discovery. Following are major software packages included in this Galaxy.
- GPSR 1.0: First version of Genomics Proteomics and System Biology Resources (GPSR). This version contain large number of perl scripts important for research in computational biology.
- GPSR 2.0: Second version of Genomics Proteomics and System Biology Resources (GPSR). This version contain large number of perl/R scripts important for research in computational chemistry.
- Various Modules: A large number of software developed at Raghava's group have been classified based on function and integrtaed in this Galaxy.
- CADDSUITE 1.6: It implement commonly used modules in the field of computer-aided drug design, that all have the same interface and can easily be used to create even complex workflows.
| col2svm |
col_add |
col_avg |
col_corr |
col_ext |
| col_mult_sel |
col_mult |
Desc graph a |
col_rem |
col_sig |
| fasta2sfasta |
motif2bin |
nuc2dnc_3end |
nuc2dnc_5end |
nuc2dnc |
| nuc2nac_3end |
nuc2nac_5end |
nuc2nac_rest |
nuc2nac |
pro2aac_ct |
| pro2aac_rest |
pro2aac_split |
pro2aac |
pro2dpc_ct |
pro2dpc_nt |
| pro2dpc |
pro2tpc |
pssm2pat |
pssmcol |
pssm_comp |
| pssm_n1 |
pssm_n2 |
pssm_n3 |
pssm_n4 |
pssm_smooth |
| seq2motif |
| Median |
Selecting descriptors a |
Barplot |
PSSM pattern |
Mean |
| Chem clust a |
Desc clust a |
Desc graph a |
| Randomization |
Chem clust b |
Chem graph b |
| Important descriptors_c |
Descriptor selection c |
Important descriptors_a |
Chem clust c |
Chem graph c |
| Chemical similarity_a | Selecting descriptors_d |
| Chemical similarity_b |
Chem clust_d |
Desc clust_d |
Chem graph_d |
Chemical similarity_d |
| Shiftcol |
Standard error |
Standard deviation |
Modified descriptor_a |
